cubar 0.5.0

• fixed a bug in est_trna_weight. Now zero w values were replaced with geometric mean (rather than the arithmetic mean) of non-zero w values.
• fixed unexpected warnings in est_optimal_codons.
• fixed bugs that update input codon table due to data.table reference semantics.
• added a new vignette explaining the mathematical details of implementation.

cubar 0.4.2

• adjust formatting
• fix a typo in get_enc code

cubar 0.4.1

• New vignette for mitochondrial codon usage analysis.
• Fix a bug when in get_enc for non-standard genetic code.

cubar 0.4.0

• Released to CRAN.

cubar 0.3.2

• Initial CRAN submission.