CRAN Package Check Results for Maintainer Evan Biederstedt <evan.biederstedt at gmail.com>

CRAN Package Check Results for Maintainer ‘Evan Biederstedt <evan.biederstedt at gmail.com>’

Last updated on 2025-06-15 17:54:39 CEST.

Package	ERROR	NOTE	OK
conos		3	8
dendsort			13
edlibR			13
gapmap			13
ggrastr	1		12
leidenAlg		3	8
N2R		4	7
pagoda2		2	9
RMTstat		2	11
Rook		2	11
sccore		2	9
vrnmf			13

Package conos

Current CRAN status: NOTE: 3, OK: 8

Version: 1.5.2
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'conosPanel', 'org.Mm.eg.db', 'p2data' Flavor: r-oldrel-macos-arm64

Version: 1.5.2
Check: installed package size
Result: NOTE installed size is 11.2Mb sub-directories of 1Mb or more: libs 9.4Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 1.5.2
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'conosPanel', 'p2data' Flavors: r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package dendsort

Current CRAN status: OK: 13

Package edlibR

Current CRAN status: OK: 13

Package gapmap

Current CRAN status: OK: 13

Package ggrastr

Current CRAN status: ERROR: 1, OK: 12

Version: 1.0.2
Check: examples
Result: ERROR Running examples in 'ggrastr-Ex.R' failed The error most likely occurred in: > ### Name: geom_beeswarm_rast > ### Title: This geom is similar to 'geom_beeswarm', but creates a raster > ### layer > ### Aliases: geom_beeswarm_rast > > ### ** Examples > > library(ggplot2) > library(ggrastr) > > ggplot(mtcars) + geom_beeswarm_rast(aes(x = factor(cyl), y = mpg), raster.dpi = 600, cex = 1.5) Error in Cairo::Cairo(type = "raster", width = width, height = height, : Graphics API version mismatch Calls: <Anonymous> ... makeContext -> makeContext.rasteriser -> <Anonymous> Execution halted Flavor: r-devel-windows-x86_64

Version: 1.0.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'Legacy_functions.Rmd' using rmarkdown Quitting from Legacy_functions.Rmd:56-59 [unnamed-chunk-2] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `Cairo::Cairo()`: ! Graphics API version mismatch --- Backtrace: ▆ 1. ├─base::print(gg_rasterized) 2. ├─ggplot2:::print.ggplot(gg_rasterized) 3. │ ├─grid::grid.draw(gtable) 4. │ └─grid:::grid.draw.gTree(gtable) 5. │ └─grDevices::recordGraphics(drawGTree(x), list(x = x), getNamespace("grid")) 6. ├─grid:::drawGTree(x) 7. │ ├─grid::grid.draw(x$children[[i]], recording = FALSE) 8. │ └─grid:::grid.draw.gTree(x$children[[i]], recording = FALSE) 9. │ └─grDevices::recordGraphics(drawGTree(x), list(x = x), getNamespace("grid")) 10. ├─grid:::drawGTree(x) 11. │ ├─grid::grid.draw(x$children[[i]], recording = FALSE) 12. │ └─grid:::grid.draw.gTree(x$children[[i]], recording = FALSE) 13. │ └─grDevices::recordGraphics(drawGTree(x), list(x = x), getNamespace("grid")) 14. ├─grid:::drawGTree(x) 15. │ ├─grid::grid.draw(x$children[[i]], recording = FALSE) 16. │ └─grid:::grid.draw.grob(x$children[[i]], recording = FALSE) 17. │ └─grDevices::recordGraphics(drawGrob(x), list(x = x), getNamespace("grid")) 18. └─grid:::drawGrob(x) 19. ├─grid:::preDraw(x) 20. └─grid:::preDraw.grob(x) 21. ├─grid::makeContext(x) 22. └─ggrastr:::makeContext.rasteriser(x) 23. └─Cairo::Cairo(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'Legacy_functions.Rmd' failed with diagnostics: Graphics API version mismatch --- failed re-building 'Legacy_functions.Rmd' --- re-building 'Raster_geoms.Rmd' using rmarkdown Quitting from Raster_geoms.Rmd:30-38 [unnamed-chunk-1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `Cairo::Cairo()`: ! Graphics API version mismatch --- Backtrace: ▆ 1. ├─tools:::.buildOneVignette(...) 2. │ ├─base::tryCatch(...) 3. │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers) 4. │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 5. │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler) 6. │ └─engine$weave(file, quiet = quiet, encoding = enc) 7. │ └─knitr:::vweave_rmarkdown(...) 8. │ └─rmarkdown::render(...) 9. │ └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet) 10. │ └─knitr:::process_file(text, output) 11. │ ├─xfun:::handle_error(...) 12. │ ├─base::withCallingHandlers(...) 13. │ └─knitr:::process_group(group) 14. │ └─knitr:::call_block(x) 15. │ └─knitr:::block_exec(params) 16. │ └─knitr:::eng_r(options) 17. │ ├─knitr:::in_input_dir(...) 18. │ │ └─knitr:::in_dir(input_dir(), expr) 19. │ └─knitr (local) evaluate(...) 20. │ └─evaluate::evaluate(...) 21. │ ├─base::withRestarts(...) 22. │ │ └─base (local) withRestartList(expr, restarts) 23. │ │ ├─base (local) withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]]) 24. │ │ │ └─base (local) doWithOneRestart(return(expr), restart) 25. │ │ └─base (local) withRestartList(expr, restarts[-nr]) 26. │ │ └─base (local) withOneRestart(expr, restarts[[1L]]) 27. │ │ └─base (local) doWithOneRestart(return(expr), restart) 28. │ ├─evaluate:::with_handlers(...) 29. │ │ ├─base::eval(call) 30. │ │ │ └─base::eval(call) 31. │ │ └─base::withCallingHandlers(...) 32. │ └─watcher$print_value(ev$value, ev$visible, envir) 33. │ ├─base::withVisible(handle_value(handler, value, visible, envir)) 34. │ └─evaluate:::handle_value(handler, value, visible, envir) 35. │ └─handler$value(value, visible) 36. │ └─knitr (local) fun(x, options = options) 37. │ ├─base::withVisible(knit_print(x, ...)) 38. │ ├─knitr::knit_print(x, ...) 39. │ └─knitr:::knit_print.default(x, ...) 40. │ └─knitr::normal_print(x) 41. │ ├─base::print(x) 42. │ └─ggplot2:::print.ggplot(x) 43. │ ├─grid::grid.draw(gtable) 44. │ └─grid:::grid.draw.gTree(gtable) 45. │ └─grDevices::recordGraphics(drawGTree(x), list(x = x), getNamespace("grid")) 46. ├─grid:::drawGTree(x) 47. │ ├─grid::grid.draw(x$children[[i]], recording = FALSE) 48. │ └─grid:::grid.draw.gTree(x$children[[i]], recording = FALSE) 49. │ └─grDevices::recordGraphics(drawGTree(x), list(x = x), getNamespace("grid")) 50. ├─grid:::drawGTree(x) 51. │ ├─grid::grid.draw(x$children[[i]], recording = FALSE) 52. │ └─grid:::grid.draw.gTree(x$children[[i]], recording = FALSE) 53. │ └─grDevices::recordGraphics(drawGTree(x), list(x = x), getNamespace("grid")) 54. ├─grid:::drawGTree(x) 55. │ ├─grid::grid.draw(x$children[[i]], recording = FALSE) 56. │ └─grid:::grid.draw.grob(x$children[[i]], recording = FALSE) 57. │ └─grDevices::recordGraphics(drawGrob(x), list(x = x), getNamespace("grid")) 58. └─grid:::drawGrob(x) 59. ├─grid:::preDraw(x) 60. └─grid:::preDraw.grob(x) 61. ├─grid::makeContext(x) 62. └─ggrastr:::makeContext.rasteriser(x) 63. └─Cairo::Cairo(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'Raster_geoms.Rmd' failed with diagnostics: Graphics API version mismatch --- failed re-building 'Raster_geoms.Rmd' SUMMARY: processing the following files failed: 'Legacy_functions.Rmd' 'Raster_geoms.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-devel-windows-x86_64

Package leidenAlg

Current CRAN status: NOTE: 3, OK: 8

Version: 1.1.5
Check: for GNU extensions in Makefiles
Result: NOTE GNU make is a SystemRequirements. Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package N2R

Current CRAN status: NOTE: 4, OK: 7

Version: 1.0.3
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Evan Biederstedt <evan.biederstedt@gmail.com>’ The Description field contains <doi:10.1109/TPAMI.2018.2889473>, <arXiv:1603.09320>. Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.0.3
Check: installed package size
Result: NOTE installed size is 5.7Mb sub-directories of 1Mb or more: libs 5.6Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package pagoda2

Current CRAN status: NOTE: 2, OK: 9

Version: 1.0.12
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'org.Dr.eg.db', 'org.Mm.eg.db' Flavor: r-oldrel-macos-arm64

Version: 1.0.12
Check: installed package size
Result: NOTE installed size is 6.8Mb sub-directories of 1Mb or more: libs 5.0Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package RMTstat

Current CRAN status: NOTE: 2, OK: 11

Version: 0.3.1
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Evan Biederstedt <evan.biederstedt@gmail.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = c("Iain", "M."), family = "Johnstone", role = "aut"), person(given = "Zongming", family = "Ma", role = "aut"), person(given = c("Patrick", "O."), family = "Perry", role = "aut"), person(given = "Morteza", family = "Shahram", role = "aut"), person(given = "Evan", family = "Biederstedt", role = c("aut", "cre"), email = "evan.biederstedt@gmail.com")) as necessary. Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. The BugReports field in DESCRIPTION has https://github.com/evanbiederstedt/RMTstat which should likely be https://github.com/evanbiederstedt/RMTstat/issues instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package Rook

Current CRAN status: NOTE: 2, OK: 11

Additional issues

rchk

Version: 1.2
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Evan Biederstedt <evan.biederstedt@gmail.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = "Jeffrey", family = "Horner", role = "aut"), person(given = "Evan", family = "Biederstedt", role = c("aut", "cre"), email = "evan.biederstedt@gmail.com")) as necessary. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package sccore

Current CRAN status: NOTE: 2, OK: 9

Version: 1.0.6
Check: installed package size
Result: NOTE installed size is 5.7Mb sub-directories of 1Mb or more: libs 4.9Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package vrnmf

Current CRAN status: OK: 13