Last updated on 2026-02-01 03:49:50 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.94 | 253.68 | 267.62 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.38 | 207.04 | 217.42 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 26.00 | 298.75 | 324.75 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 28.00 | 350.39 | 378.39 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 198.00 | 219.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.55 | 283.39 | 297.94 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.60 | 288.17 | 302.77 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 482.00 | 492.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 189.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 616.00 | 626.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 241.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [105s/426s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.770, system: 0.072, elapsed: 1.763 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.552, system: 0.149, elapsed: 14.164 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.019, elapsed: 1.121 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.533, system: 0.808, elapsed: 20.713 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.004, elapsed: 0.176 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.966, system: 1.085, elapsed: 38.637 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.619, system: 0.051, elapsed: 1.665 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.889, system: 0.288, elapsed: 14.429 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.016, elapsed: 0.902 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.265, system: 0.787, elapsed: 30.953 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.011, elapsed: 0.238 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.801, system: 1.187, elapsed: 48.799 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.944, system: 0.122, elapsed: 2.748 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.834, system: 0.402, elapsed: 12.709 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.391, system: 0.034, elapsed: 0.351 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.338, system: 1.086, elapsed: 35.118 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.007, elapsed: 0.506 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.297, system: 0.355, elapsed: 2.292 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.746, system: 2.073, elapsed: 54.839 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.590, system: 0.042, elapsed: 5.883 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.560, system: 0.055, elapsed: 30.977 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.226, system: 0.018, elapsed: 1.302 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.151, system: 0.919, elapsed: 181.389 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.003, elapsed: 0.409 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.395, system: 0.698, elapsed: 52.884 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.821, system: 1.765, elapsed: 274.763 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [103s/560s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.776, system: 0.094, elapsed: 2.871 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.918, system: 0.435, elapsed: 15.106 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.023, elapsed: 0.356 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.986, system: 0.926, elapsed: 11.517 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.010, elapsed: 0.258 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.657, system: 1.530, elapsed: 30.903 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.781, system: 0.074, elapsed: 4.742 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.622, system: 0.112, elapsed: 33.152 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.211, system: 0.018, elapsed: 1.244 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.900, system: 0.909, elapsed: 182.037 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.424 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.264, system: 1.143, elapsed: 222.880 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.564, system: 0.031, elapsed: 4.436 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.521, system: 0.051, elapsed: 27.219 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.016, elapsed: 1.209 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.951, system: 0.952, elapsed: 181.311 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.438 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.161, system: 0.292, elapsed: 1.778 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.252, system: 1.375, elapsed: 218.070 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.598, system: 0.042, elapsed: 4.332 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.646, system: 0.110, elapsed: 19.990 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.015, elapsed: 0.614 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.014, system: 0.807, elapsed: 24.490 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.005, elapsed: 0.194 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.129, system: 0.737, elapsed: 26.090 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.447, system: 1.749, elapsed: 77.023 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64