Provides functionality for performing cohort incidence analyses against data stored in the OMOP Common Data Model (CDM). The package generates database-specific SQL, executes analyses across supported database platforms, and returns standardized incidence estimates using configurable time-at-risk, stratification, and cohort definitions. It is intended to support reproducible observational research within the OHDSI analytics framework.
| Version: | 4.2.0 |
| Depends: | R (≥ 3.2.2), DatabaseConnector (≥ 3.0.0) |
| Imports: | rlang, rJava (≥ 0.9-10), checkmate, jsonlite, SqlRender (≥ 1.6.0) |
| Suggests: | testthat (≥ 3.0.0), knitr, rmarkdown, withr, readr, Eunomia, duckdb, R6 |
| Published: | 2026-08-25 |
| DOI: | 10.32614/CRAN.package.CohortIncidence (may not be active yet) |
| Author: | Christopher Knoll [aut, cre] |
| Maintainer: | Christopher Knoll <cknoll at ohdsi.org> |
| BugReports: | https://github.com/OHDSI/CohortIncidence/issues |
| License: | Apache License 2.0 |
| URL: | https://ohdsi.github.io/CohortIncidence/ |
| NeedsCompilation: | yes |
| SystemRequirements: | Java (>= 8) |
| Materials: | README, NEWS |
| CRAN checks: | CohortIncidence results |
| Reference manual: | CohortIncidence.html , CohortIncidence.pdf |
| Vignettes: |
CohortIncidence Method Documentation (source, R code) Using CohortIncidence (source, R code) |
| Package source: | CohortIncidence_4.2.0.tar.gz |
| Windows binaries: | r-devel: not available, r-release: not available, r-oldrel: not available |
| macOS binaries: | r-release (arm64): CohortIncidence_4.2.0.tgz, r-oldrel (arm64): CohortIncidence_4.2.0.tgz, r-release (x86_64): CohortIncidence_4.2.0.tgz, r-oldrel (x86_64): CohortIncidence_4.2.0.tgz |
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