soReta

Ready-to-analyze datasets from camera trap data.

soReta takes camera trap detection data (in the format produced by ‘camtrapR’, the standard convention in the field) and builds datasets ready for statistical analysis: GLMM/GAMM on counts and RAI at various temporal levels, group size, occupancy, kernel/circular analysis of activity patterns, temporal interactions between species, hierarchical diel models, and classic capture-mark-recapture.

(JPG version also available)

Installation

soReta is not yet on CRAN. Install the development version from GitHub:

# install.packages("remotes")
remotes::install_github("OrlandoTomassini/soReta", build_vignettes = TRUE)

Quick example

library(soReta)

ds_month <- build_site_month(
  recordTable   = recordTable_soReta,
  camOp         = camOp_soReta,
  threshold_min = 30
)
head(ds_month)

Documentation

See vignette("soReta") for a full walkthrough of every function, or browseVignettes("soReta").

License

GPL (>= 3)