Last updated on 2026-09-17 13:51:08 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.0.1 | 117.51 | 406.50 | 524.01 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.0.1 | 84.71 | 259.81 | 344.52 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.0.1 | 118.00 | 315.13 | 433.13 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.0.1 | 99.00 | 302.33 | 401.33 | ERROR | |
| r-devel-windows-x86_64 | 0.0.1 | 242.00 | 1397.00 | 1639.00 | OK | |
| r-patched-linux-x86_64 | 0.0.1 | 117.87 | 385.50 | 503.37 | ERROR | |
| r-release-linux-x86_64 | 0.0.1 | 118.02 | 381.35 | 499.37 | ERROR | |
| r-release-macos-arm64 | 0.0.1 | 34.00 | 89.00 | 123.00 | ERROR | |
| r-release-macos-x86_64 | 0.0.1 | 92.00 | 313.00 | 405.00 | ERROR | |
| r-release-windows-x86_64 | 0.0.1 | 250.00 | 1324.00 | 1574.00 | OK | |
| r-oldrel-macos-arm64 | 0.0.1 | 43.00 | 105.00 | 148.00 | ERROR | |
| r-oldrel-macos-x86_64 | 0.0.1 | 91.00 | 305.00 | 396.00 | ERROR | |
| r-oldrel-windows-x86_64 | 0.0.1 | 201.00 | 1359.00 | 1560.00 | OK |
Version: 0.0.1
Check: examples
Result: ERROR
Running examples in ‘ICESat2VegR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ATL03_ATL08_photons_attributes_dt_join
> ### Title: Join ATL03 and ATL08 photons attributes
> ### Aliases: ATL03_ATL08_photons_attributes_dt_join
>
> ### ** Examples
>
> if (requireNamespace("hdf5r", quietly = TRUE)) {
+ # Specifying the path to ATL03 file
+ atl03_path <- system.file("extdata",
+ "atl03_clip.h5",
+ package = "ICESat2VegR"
+ )
+
+ # Specifying the path to ATL08 file
+ atl08_path <- system.file("extdata",
+ "atl08_clip.h5",
+ package = "ICESat2VegR"
+ )
+
+ # Reading ATL03 data (h5 file)
+ atl03_h5 <- ATL03_read(atl03_path = atl03_path)
+
+ # Reading ATL08 data (h5 file)
+ atl08_h5 <- ATL08_read(atl08_path = atl08_path)
+
+ # # Extracting ATL03 and ATL08 photons and heights
+ atl03_atl08_dt <- ATL03_ATL08_photons_attributes_dt_join(atl03_h5, atl08_h5)
+ head(atl03_atl08_dt)
+
+ close(atl03_h5)
+ close(atl08_h5)
+
+ }
Error in (function () : id is invalid
Calls: ATL08_read ... initialize -> <Anonymous> -> <Anonymous> -> <Anonymous>
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.0.1
Check: whether startup messages can be suppressed
Result: NOTE
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
cause: Can't use Python at `/usr/sbin/pypy`
cause: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
It looks like this package (or a package it requires) has a startup
message which cannot be suppressed: see ?packageStartupMessage.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.0.1
Check: dependencies in R code
Result: NOTE
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
cause: Can't use Python at `/usr/sbin/pypy`
cause: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.0.1
Check: S3 generic/method consistency
Result: WARN
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
cause: Can't use Python at `/usr/sbin/pypy`
cause: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
See section ‘Generic functions and methods’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.0.1
Check: replacement functions
Result: WARN
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
cause: Can't use Python at `/usr/sbin/pypy`
cause: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
The argument of a replacement function which corresponds to the right
hand side must be named ‘value’.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.0.1
Check: foreign function calls
Result: NOTE
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
cause: Can't use Python at `/usr/sbin/pypy`
cause: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.0.1
Check: R code for possible problems
Result: NOTE
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
cause: Can't use Python at `/usr/sbin/pypy`
cause: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
cause: Can't use Python at `/usr/sbin/pypy`
cause: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
cause: Can't use Python at `/usr/sbin/pypy`
cause: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.0.1
Check: for missing documentation entries
Result: WARN
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
cause: Can't use Python at `/usr/sbin/pypy`
cause: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
All user-level objects in a package should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.0.1
Check: for code/documentation mismatches
Result: WARN
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
cause: Can't use Python at `/usr/sbin/pypy`
cause: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
cause: Can't use Python at `/usr/sbin/pypy`
cause: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
cause: Can't use Python at `/usr/sbin/pypy`
cause: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.0.1
Check: Rd \usage sections
Result: NOTE
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
cause: Can't use Python at `/usr/sbin/pypy`
cause: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.0.1
Check: examples
Result: ERROR
Running examples in ‘ICESat2VegR-Ex.R’ failed
The error most likely occurred in:
> ### Name: ATL03_ATL08_photons_attributes_dt_join
> ### Title: Join ATL03 and ATL08 photons attributes
> ### Aliases: ATL03_ATL08_photons_attributes_dt_join
>
> ### ** Examples
>
> if (requireNamespace("hdf5r", quietly = TRUE)) {
+ # Specifying the path to ATL03 file
+ atl03_path <- system.file("extdata",
+ "atl03_clip.h5",
+ package = "ICESat2VegR"
+ )
+
+ # Specifying the path to ATL08 file
+ atl08_path <- system.file("extdata",
+ "atl08_clip.h5",
+ package = "ICESat2VegR"
+ )
+
+ # Reading ATL03 data (h5 file)
+ atl03_h5 <- ATL03_read(atl03_path = atl03_path)
+
+ # Reading ATL08 data (h5 file)
+ atl08_h5 <- ATL08_read(atl08_path = atl08_path)
+
+ # # Extracting ATL03 and ATL08 photons and heights
+ atl03_atl08_dt <- ATL03_ATL08_photons_attributes_dt_join(atl03_h5, atl08_h5)
+ head(atl03_atl08_dt)
+
+ close(atl03_h5)
+ close(atl08_h5)
+
+ }
Error in (function () : id is invalid
Calls: ATL08_read ... initialize -> <Anonymous> -> <Anonymous> -> <Anonymous>
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-oldrel-macos-arm64
Version: 0.0.1
Check: whether startup messages can be suppressed
Result: NOTE
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
Caused by: Can't use Python at `/usr/sbin/pypy`
Caused by: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
It looks like this package (or a package it requires) has a startup
message which cannot be suppressed: see ?packageStartupMessage.
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.0.1
Check: dependencies in R code
Result: NOTE
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
Caused by: Can't use Python at `/usr/sbin/pypy`
Caused by: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.0.1
Check: S3 generic/method consistency
Result: WARN
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
Caused by: Can't use Python at `/usr/sbin/pypy`
Caused by: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
See section ‘Generic functions and methods’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.0.1
Check: replacement functions
Result: WARN
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
Caused by: Can't use Python at `/usr/sbin/pypy`
Caused by: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
The argument of a replacement function which corresponds to the right
hand side must be named ‘value’.
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.0.1
Check: foreign function calls
Result: NOTE
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
Caused by: Can't use Python at `/usr/sbin/pypy`
Caused by: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.0.1
Check: R code for possible problems
Result: NOTE
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
Caused by: Can't use Python at `/usr/sbin/pypy`
Caused by: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
Caused by: Can't use Python at `/usr/sbin/pypy`
Caused by: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
Caused by: Can't use Python at `/usr/sbin/pypy`
Caused by: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.0.1
Check: for missing documentation entries
Result: WARN
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
Caused by: Can't use Python at `/usr/sbin/pypy`
Caused by: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
All user-level objects in a package should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.0.1
Check: for code/documentation mismatches
Result: WARN
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
Caused by: Can't use Python at `/usr/sbin/pypy`
Caused by: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
Caused by: Can't use Python at `/usr/sbin/pypy`
Caused by: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
Caused by: Can't use Python at `/usr/sbin/pypy`
Caused by: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.0.1
Check: Rd \usage sections
Result: NOTE
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
Caused by: Can't use Python at `/usr/sbin/pypy`
Caused by: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.0.1
Check: examples
Result: ERROR
Running examples in ‘ICESat2VegR-Ex.R’ failed
The error most likely occurred in:
> ### Name: ATL03_ATL08_photons_attributes_dt_join
> ### Title: Join ATL03 and ATL08 photons attributes
> ### Aliases: ATL03_ATL08_photons_attributes_dt_join
>
> ### ** Examples
>
> if (requireNamespace("hdf5r", quietly = TRUE)) {
+ # Specifying the path to ATL03 file
+ atl03_path <- system.file("extdata",
+ "atl03_clip.h5",
+ package = "ICESat2VegR"
+ )
+
+ # Specifying the path to ATL08 file
+ atl08_path <- system.file("extdata",
+ "atl08_clip.h5",
+ package = "ICESat2VegR"
+ )
+
+ # Reading ATL03 data (h5 file)
+ atl03_h5 <- ATL03_read(atl03_path = atl03_path)
+
+ # Reading ATL08 data (h5 file)
+ atl08_h5 <- ATL08_read(atl08_path = atl08_path)
+
+ # # Extracting ATL03 and ATL08 photons and heights
+ atl03_atl08_dt <- ATL03_ATL08_photons_attributes_dt_join(atl03_h5, atl08_h5)
+ head(atl03_atl08_dt)
+
+ close(atl03_h5)
+ close(atl08_h5)
+
+ }
Error in self$h5$ls() : HDF5-API Errors:
error #000: ../../src/hdf5-1.14.5/src/H5Ldeprec.c in H5Literate1(): line 166: invalid location identifier
class: HDF5
major: Invalid arguments to routine
minor: Inappropriate type
error #001: ../../src/hdf5-1.14.5/src/H5VLint.c in H5VL_vol_object(): line 1748: invalid identifier
class: HDF5
major: Invalid arguments to routine
minor: Inappropriate type
Calls: ATL08_read ... <Anonymous> -> initialize -> <Anonymous> -> <Anonymous> -> .Call
Execution halted
Flavor: r-release-macos-arm64
Version: 0.0.1
Check: examples
Result: ERROR
Running examples in ‘ICESat2VegR-Ex.R’ failed
The error most likely occurred in:
> ### Name: ATL03_ATL08_photons_attributes_dt_join
> ### Title: Join ATL03 and ATL08 photons attributes
> ### Aliases: ATL03_ATL08_photons_attributes_dt_join
>
> ### ** Examples
>
> if (requireNamespace("hdf5r", quietly = TRUE)) {
+ # Specifying the path to ATL03 file
+ atl03_path <- system.file("extdata",
+ "atl03_clip.h5",
+ package = "ICESat2VegR"
+ )
+
+ # Specifying the path to ATL08 file
+ atl08_path <- system.file("extdata",
+ "atl08_clip.h5",
+ package = "ICESat2VegR"
+ )
+
+ # Reading ATL03 data (h5 file)
+ atl03_h5 <- ATL03_read(atl03_path = atl03_path)
+
+ # Reading ATL08 data (h5 file)
+ atl08_h5 <- ATL08_read(atl08_path = atl08_path)
+
+ # # Extracting ATL03 and ATL08 photons and heights
+ atl03_atl08_dt <- ATL03_ATL08_photons_attributes_dt_join(atl03_h5, atl08_h5)
+ head(atl03_atl08_dt)
+
+ close(atl03_h5)
+ close(atl08_h5)
+
+ }
|
| | 0%
|
|================== | 25%Error in (function () : id is invalid
Calls: ATL03_ATL08_photons_attributes_dt_join ... [.H5D -> <Anonymous> -> as.integer64 -> <Anonymous>
Execution halted
Flavor: r-release-macos-x86_64
Version: 0.0.1
Check: examples
Result: ERROR
Running examples in ‘ICESat2VegR-Ex.R’ failed
The error most likely occurred in:
> ### Name: ATL03_ATL08_photons_attributes_dt_join
> ### Title: Join ATL03 and ATL08 photons attributes
> ### Aliases: ATL03_ATL08_photons_attributes_dt_join
>
> ### ** Examples
>
> if (requireNamespace("hdf5r", quietly = TRUE)) {
+ # Specifying the path to ATL03 file
+ atl03_path <- system.file("extdata",
+ "atl03_clip.h5",
+ package = "ICESat2VegR"
+ )
+
+ # Specifying the path to ATL08 file
+ atl08_path <- system.file("extdata",
+ "atl08_clip.h5",
+ package = "ICESat2VegR"
+ )
+
+ # Reading ATL03 data (h5 file)
+ atl03_h5 <- ATL03_read(atl03_path = atl03_path)
+
+ # Reading ATL08 data (h5 file)
+ atl08_h5 <- ATL08_read(atl08_path = atl08_path)
+
+ # # Extracting ATL03 and ATL08 photons and heights
+ atl03_atl08_dt <- ATL03_ATL08_photons_attributes_dt_join(atl03_h5, atl08_h5)
+ head(atl03_atl08_dt)
+
+ close(atl03_h5)
+ close(atl08_h5)
+
+ }
|
| | 0%
|
|================== | 25%Error in (function () : id is invalid
Calls: ATL03_ATL08_photons_attributes_dt_join ... <Anonymous> -> standalone_H5D_get_type -> <Anonymous>
Execution halted
Flavor: r-oldrel-macos-x86_64