Last updated on 2026-08-03 04:49:43 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.4 | 4.10 | 74.56 | 78.66 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.4 | 2.87 | 51.52 | 54.39 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.4 | 126.52 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.4 | 53.40 | NOTE | |||
| r-devel-windows-x86_64 | 1.4 | 6.00 | 88.00 | 94.00 | NOTE | |
| r-patched-linux-x86_64 | 1.4 | 4.53 | 69.80 | 74.33 | NOTE | |
| r-release-linux-x86_64 | 1.4 | 3.30 | 71.42 | 74.72 | NOTE | |
| r-release-macos-arm64 | 1.4 | 1.00 | 27.00 | 28.00 | NOTE | |
| r-release-macos-x86_64 | 1.4 | 3.00 | 92.00 | 95.00 | NOTE | |
| r-release-windows-x86_64 | 1.4 | 6.00 | 97.00 | 103.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.4 | NOTE | ||||
| r-oldrel-macos-x86_64 | 1.4 | 3.00 | 76.00 | 79.00 | NOTE | |
| r-oldrel-windows-x86_64 | 1.4 | 8.00 | 108.00 | 116.00 | NOTE |
Version: 1.4
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Rampal S. Etienne <r.s.etienne@rug.nl>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = c("Rampal", "S."),
family = "Etienne",
role = c("aut", "cre"),
email = "r.s.etienne@rug.nl")
as necessary.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.4
Check: Rd files
Result: NOTE
checkRd: (-1) pbd_loglik.Rd:31: Lost braces
31 | \code{pars2[1]} {set the conditioning on non-extinction of the clade (1) or not (0) \cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:32: Lost braces
32 | \code{pars2[2]} {sets whether the likelihood is for the branching times (0) or the phylogeny (1) \cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:33: Lost braces
33 | \code{pars2[3]} {sets whether the first element of the branching times is the stem (1) or the crown (2) age \cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:34: Lost braces
34 | \code{pars2[4]} {sets whether the parameters and likelihood should be shown on screen (1) or not (0) \cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:35: Lost braces
35 | \code{pars2[5]} {sets which method should be used in the ode-solver. Default is 'lsoda'. See package deSolve for details. \cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:36: Lost braces
36 | \code{pars2[6]}{Sets the lower bound of the number of species on which conditioning should be done when cond = 2. Set this to 0 when conditioning should be done on precisely the number of species (default)\cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:37: Lost braces
37 | \code{pars2[7]}{Sets the upper bound of the number of species on which conditioning should be done when cond = 2. Set this to 0 when conditioning should be done on precisely the number of species (default)\cr \cr}
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.4
Check: for new files in some other directories
Result: NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp05HgWP’ ‘~/tmp/scratch/Rtmp0oLoBR’
‘~/tmp/scratch/Rtmp13lpBE’ ‘~/tmp/scratch/Rtmp1zWvbM’
‘~/tmp/scratch/Rtmp32e7xJ’ ‘~/tmp/scratch/Rtmp3AvnHQ’
‘~/tmp/scratch/Rtmp3V0mW5’ ‘~/tmp/scratch/Rtmp4G7q1I’
‘~/tmp/scratch/Rtmp4xb8dC’ ‘~/tmp/scratch/Rtmp5VoH0N’
‘~/tmp/scratch/Rtmp5pzPPV’ ‘~/tmp/scratch/Rtmp6NrtJP’
‘~/tmp/scratch/Rtmp7t48Bb’ ‘~/tmp/scratch/Rtmp8FYdq9’
‘~/tmp/scratch/Rtmp98NQez’ ‘~/tmp/scratch/Rtmp9MYWjQ’
‘~/tmp/scratch/Rtmp9c8MSb’ ‘~/tmp/scratch/RtmpA2HpYt’
‘~/tmp/scratch/RtmpAmqOG2’ ‘~/tmp/scratch/RtmpBftq1t’
‘~/tmp/scratch/RtmpCDRDnD’ ‘~/tmp/scratch/RtmpCcQ7u6’
‘~/tmp/scratch/RtmpCjgL5E’ ‘~/tmp/scratch/RtmpCxuX1q’
‘~/tmp/scratch/RtmpDFUcc5’ ‘~/tmp/scratch/RtmpDR7uHl’
‘~/tmp/scratch/RtmpEGPe7m’ ‘~/tmp/scratch/RtmpEOkbKq’
‘~/tmp/scratch/RtmpFTDWr0’ ‘~/tmp/scratch/RtmpFwZDCw’
‘~/tmp/scratch/RtmpGBPUoC’ ‘~/tmp/scratch/RtmpGmDJDi’
‘~/tmp/scratch/RtmpH0ekob’ ‘~/tmp/scratch/RtmpHAUDox’
‘~/tmp/scratch/RtmpHPuiBL’ ‘~/tmp/scratch/RtmpHiVdDp’
‘~/tmp/scratch/RtmpHrSV1m’ ‘~/tmp/scratch/RtmpHwVtir’
‘~/tmp/scratch/RtmpIqCnNQ’ ‘~/tmp/scratch/RtmpJAnSIG’
‘~/tmp/scratch/RtmpJLDpZv’ ‘~/tmp/scratch/RtmpJaIUsT’
‘~/tmp/scratch/RtmpJbosDV’ ‘~/tmp/scratch/RtmpJkewcq’
‘~/tmp/scratch/RtmpK7oyLk’ ‘~/tmp/scratch/RtmpKXiurN’
‘~/tmp/scratch/RtmpKaXBOV’ ‘~/tmp/scratch/RtmpKqlblY’
‘~/tmp/scratch/RtmpOjgM9J’ ‘~/tmp/scratch/RtmpPeueSy’
‘~/tmp/scratch/RtmpPk7GwX’ ‘~/tmp/scratch/RtmpQdaFf8’
‘~/tmp/scratch/RtmpQjMLzY’ ‘~/tmp/scratch/RtmpQsJqHe’
‘~/tmp/scratch/RtmpRJ8b3D’ ‘~/tmp/scratch/RtmpSEYQTm’
‘~/tmp/scratch/RtmpTP4cXv’ ‘~/tmp/scratch/RtmpTkOv79’
‘~/tmp/scratch/RtmpUJLyuq’ ‘~/tmp/scratch/RtmpUYKgSo’
‘~/tmp/scratch/RtmpUcZklM’ ‘~/tmp/scratch/RtmpVBoH38’
‘~/tmp/scratch/RtmpVgCeGE’ ‘~/tmp/scratch/RtmpWAKlFa’
‘~/tmp/scratch/RtmpWKgP6M’ ‘~/tmp/scratch/RtmpWmCIZf’
‘~/tmp/scratch/RtmpXpQ7nM’ ‘~/tmp/scratch/RtmpYtKuC6’
‘~/tmp/scratch/RtmpZTbVtC’ ‘~/tmp/scratch/RtmpZWcl0x’
‘~/tmp/scratch/RtmpZqpgn3’ ‘~/tmp/scratch/Rtmpa0xQrl’
‘~/tmp/scratch/RtmpaKeYVb’ ‘~/tmp/scratch/Rtmpd2HDNq’
‘~/tmp/scratch/Rtmpd6EN8X’ ‘~/tmp/scratch/RtmpdfLQ9R’
‘~/tmp/scratch/RtmpdoSipZ’ ‘~/tmp/scratch/Rtmpevgly5’
‘~/tmp/scratch/RtmpfXYnwJ’ ‘~/tmp/scratch/Rtmpfz7ERR’
‘~/tmp/scratch/RtmpgzWP7M’ ‘~/tmp/scratch/Rtmphob3R2’
‘~/tmp/scratch/Rtmpj8apcY’ ‘~/tmp/scratch/RtmpjFTgDp’
‘~/tmp/scratch/RtmpjkUhv7’ ‘~/tmp/scratch/RtmpjmpFUI’
‘~/tmp/scratch/RtmpkB8OzP’ ‘~/tmp/scratch/RtmpkDawuy’
‘~/tmp/scratch/RtmpkUw09u’ ‘~/tmp/scratch/RtmploLWfC’
‘~/tmp/scratch/Rtmpm5TS2A’ ‘~/tmp/scratch/RtmpmHl1E5’
‘~/tmp/scratch/RtmpmaTmhn’ ‘~/tmp/scratch/Rtmpmb0ASI’
‘~/tmp/scratch/RtmpnF7b5b’ ‘~/tmp/scratch/Rtmpns6VnW’
‘~/tmp/scratch/RtmppBwy0U’ ‘~/tmp/scratch/RtmpqlIF1A’
‘~/tmp/scratch/RtmpqpzGcz’ ‘~/tmp/scratch/RtmpqrLe6R’
‘~/tmp/scratch/Rtmpr2AJll’ ‘~/tmp/scratch/RtmprSPyK0’
‘~/tmp/scratch/RtmpsYtM4s’ ‘~/tmp/scratch/RtmpuMqvas’
‘~/tmp/scratch/RtmpusPJAc’ ‘~/tmp/scratch/Rtmpv48z5d’
‘~/tmp/scratch/RtmpvEpACW’ ‘~/tmp/scratch/RtmpvhHquj’
‘~/tmp/scratch/RtmpvjhmFp’ ‘~/tmp/scratch/Rtmpw3C3DG’
‘~/tmp/scratch/RtmpwAMkps’ ‘~/tmp/scratch/RtmpwX7Tia’
‘~/tmp/scratch/RtmpwrISts’ ‘~/tmp/scratch/RtmpwzD8I7’
‘~/tmp/scratch/RtmpxNEJdV’ ‘~/tmp/scratch/RtmpyQl941’
‘~/tmp/scratch/RtmpyreSio’ ‘~/tmp/scratch/Rtmpz11hUP’
‘~/tmp/scratch/RtmpziBY8c’ ‘~/tmp/scratch/RtmpznkrJy’
‘~/tmp/scratch/ccERAbIG.s’ ‘~/tmp/scratch/ccYm6IG2.s’
‘~/tmp/scratch/ccbVTwpn.s’ ‘~/tmp/scratch/xvfb-run.0hzqkD’
‘~/tmp/scratch/xvfb-run.100Ne0’ ‘~/tmp/scratch/xvfb-run.3wIL02’
‘~/tmp/scratch/xvfb-run.5hErE6’ ‘~/tmp/scratch/xvfb-run.6OKX1t’
‘~/tmp/scratch/xvfb-run.6Wj1sO’ ‘~/tmp/scratch/xvfb-run.6skDHR’
‘~/tmp/scratch/xvfb-run.8WvJNV’ ‘~/tmp/scratch/xvfb-run.9dqN09’
‘~/tmp/scratch/xvfb-run.BUB6aM’ ‘~/tmp/scratch/xvfb-run.FHsB33’
‘~/tmp/scratch/xvfb-run.GSlaFy’ ‘~/tmp/scratch/xvfb-run.Kfwqo5’
‘~/tmp/scratch/xvfb-run.OaCs4d’ ‘~/tmp/scratch/xvfb-run.SFH6x2’
‘~/tmp/scratch/xvfb-run.SfHzpo’ ‘~/tmp/scratch/xvfb-run.SiNrWD’
‘~/tmp/scratch/xvfb-run.TJZPe9’ ‘~/tmp/scratch/xvfb-run.Tic4Xj’
‘~/tmp/scratch/xvfb-run.UQ4ZrY’ ‘~/tmp/scratch/xvfb-run.WsT8Yc’
‘~/tmp/scratch/xvfb-run.c9N9lR’ ‘~/tmp/scratch/xvfb-run.dA0WRn’
‘~/tmp/scratch/xvfb-run.dxcFZJ’ ‘~/tmp/scratch/xvfb-run.f6X02g’
‘~/tmp/scratch/xvfb-run.fz0FN5’ ‘~/tmp/scratch/xvfb-run.hslC26’
‘~/tmp/scratch/xvfb-run.lTZLre’ ‘~/tmp/scratch/xvfb-run.mtwP7q’
‘~/tmp/scratch/xvfb-run.n3iM06’ ‘~/tmp/scratch/xvfb-run.nUwb9o’
‘~/tmp/scratch/xvfb-run.oNfX6y’ ‘~/tmp/scratch/xvfb-run.uv4eLI’
‘~/tmp/scratch/xvfb-run.vZdQQt’ ‘~/tmp/scratch/xvfb-run.z4rvQX’
‘/dev/shm/00087418-aa07-4d02-9241-2c6d145dcaa0’
‘/dev/shm/00087418-aa07-4d02-9241-2c6d145dcaa0_counter’
‘/dev/shm/0e910bbc-4b25-4eca-8c17-a0ece7d90db6’
‘/dev/shm/0e910bbc-4b25-4eca-8c17-a0ece7d90db6_counter’
‘/dev/shm/3a90dbc5-083c-49e6-9df0-43c626a1242c’
‘/dev/shm/3a90dbc5-083c-49e6-9df0-43c626a1242c_counter’
‘/dev/shm/3c5c0e26-c9bb-4b17-bbc4-d228680daaff’
‘/dev/shm/3c5c0e26-c9bb-4b17-bbc4-d228680daaff_counter’
‘/dev/shm/3f09a948-d88f-47f2-a0ca-8b509d0a98d2’
‘/dev/shm/3f09a948-d88f-47f2-a0ca-8b509d0a98d2_counter’
‘/dev/shm/48356ba8-ef55-420c-a492-632f00162285’
‘/dev/shm/48356ba8-ef55-420c-a492-632f00162285_counter’
‘/dev/shm/5cdf0dc9-e58f-48b1-b507-8e48ba4c1fb2’
‘/dev/shm/5cdf0dc9-e58f-48b1-b507-8e48ba4c1fb2_counter’
‘/dev/shm/684db439-24e8-430d-b63a-9fa84df91330’
‘/dev/shm/7130a692-00fe-434e-ab49-caf8697cffcd’
‘/dev/shm/7130a692-00fe-434e-ab49-caf8697cffcd_counter’
‘/dev/shm/7914ef3d-6a51-484f-9134-8c3c541d1ded’
‘/dev/shm/7914ef3d-6a51-484f-9134-8c3c541d1ded_counter’
‘/dev/shm/84b512a0-a8cd-403b-9442-160e62799879’
‘/dev/shm/84b512a0-a8cd-403b-9442-160e62799879_counter’
‘/dev/shm/abbb6424-dbd6-4d1d-92b1-7227752a29b7’
‘/dev/shm/abbb6424-dbd6-4d1d-92b1-7227752a29b7_counter’
‘/dev/shm/b5e38ded-409f-4e25-bf95-0572d5ef2073’
‘/dev/shm/b5e38ded-409f-4e25-bf95-0572d5ef2073_counter’
‘/dev/shm/b80b88bc-1801-4a9f-969d-33ac08b64534’
‘/dev/shm/b80b88bc-1801-4a9f-969d-33ac08b64534_counter’
‘/dev/shm/c71c778f-ad86-4392-9a85-e08b435bd85a’
‘/dev/shm/c71c778f-ad86-4392-9a85-e08b435bd85a_counter’
‘/dev/shm/sem.00087418-aa07-4d02-9241-2c6d145dcaa0_bigmemory_counter_mutex’
‘/dev/shm/sem.0e910bbc-4b25-4eca-8c17-a0ece7d90db6_bigmemory_counter_mutex’
‘/dev/shm/sem.3a90dbc5-083c-49e6-9df0-43c626a1242c_bigmemory_counter_mutex’
‘/dev/shm/sem.3c5c0e26-c9bb-4b17-bbc4-d228680daaff_bigmemory_counter_mutex’
‘/dev/shm/sem.48356ba8-ef55-420c-a492-632f00162285_bigmemory_counter_mutex’
‘/dev/shm/sem.5cdf0dc9-e58f-48b1-b507-8e48ba4c1fb2_bigmemory_counter_mutex’
‘/dev/shm/sem.7130a692-00fe-434e-ab49-caf8697cffcd_bigmemory_counter_mutex’
‘/dev/shm/sem.84b512a0-a8cd-403b-9442-160e62799879_bigmemory_counter_mutex’
‘/dev/shm/sem.abbb6424-dbd6-4d1d-92b1-7227752a29b7_bigmemory_counter_mutex’
‘/dev/shm/sem.b5e38ded-409f-4e25-bf95-0572d5ef2073_bigmemory_counter_mutex’
‘/dev/shm/sem.b80b88bc-1801-4a9f-969d-33ac08b64534_bigmemory_counter_mutex’
‘/dev/shm/sem.c71c778f-ad86-4392-9a85-e08b435bd85a_bigmemory_counter_mutex’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.4
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘ade4’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc