Last updated on 2026-01-24 16:49:50 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.04 | 262.25 | 274.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | OK | ||||
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 26.00 | 298.75 | 324.75 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 30.00 | 403.35 | 433.35 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 19.00 | 193.00 | 212.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 16.07 | 259.11 | 275.18 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.99 | 270.09 | 284.08 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 681.00 | 691.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 346.00 | 356.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 254.00 | 280.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/11m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.656, system: 0.066, elapsed: 2.690 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.921, system: 0.239, elapsed: 15.233 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.018, elapsed: 0.868 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.998, system: 0.759, elapsed: 27.856 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.009, elapsed: 0.204 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.548, system: 1.121, elapsed: 48.045 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.711, system: 0.078, elapsed: 2.158 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.842, system: 0.247, elapsed: 27.840 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.016, elapsed: 1.244 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.163, system: 0.932, elapsed: 182.345 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.003, elapsed: 0.417 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.675, system: 1.304, elapsed: 214.928 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.526, system: 0.033, elapsed: 4.160 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.586, system: 0.055, elapsed: 25.304 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.314, system: 0.018, elapsed: 1.453 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.142, system: 0.989, elapsed: 181.241 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.007, elapsed: 0.501 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.284, system: 0.361, elapsed: 2.281 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.715, system: 1.499, elapsed: 216.628 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.536, system: 0.035, elapsed: 4.245 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.614, system: 0.092, elapsed: 24.416 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.016, elapsed: 1.217 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.888, system: 0.896, elapsed: 70.327 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.004, elapsed: 0.189 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.855, system: 0.723, elapsed: 40.742 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.120, system: 1.804, elapsed: 142.610 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/255s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.573, system: 0.037, elapsed: 5.735 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.562, system: 0.048, elapsed: 33.375 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.016, elapsed: 0.717 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.320, system: 0.443, elapsed: 16.972 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.004, elapsed: 0.603 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.394, system: 0.571, elapsed: 59.485 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.566, system: 0.029, elapsed: 5.527 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.521, system: 0.053, elapsed: 33.213 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.015, elapsed: 0.712 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.237, system: 0.418, elapsed: 13.194 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.465 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.257, system: 0.537, elapsed: 55.045 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.543, system: 0.029, elapsed: 4.181 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.591, system: 0.052, elapsed: 26.597 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.013, elapsed: 0.587 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.310, system: 0.436, elapsed: 12.885 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.005, elapsed: 0.491 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.212, system: 0.333, elapsed: 2.152 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.706, system: 0.891, elapsed: 48.796 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.581, system: 0.032, elapsed: 4.378 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.609, system: 0.087, elapsed: 25.493 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.015, elapsed: 0.558 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.322, system: 0.457, elapsed: 12.501 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.002, elapsed: 0.478 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.946, system: 0.557, elapsed: 30.074 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.506, system: 1.179, elapsed: 75.360 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64